Previous Next

Plant Detectives Manual: a research-led approach for teaching plant science



Armengaud P, Zambaux K, Hills A, Sulpice R, Pattison RJ, Blatt MR, Amtmann A (2009) EZ-Rhizo: integrated software for the fast and accurate measurement of root system architecture. The Plant Journal 57 (5):945–56

Arvidsson S, Pérez-Rodríguez P, Mueller-Roeber B (2011) A growth phenotyping pipeline for Arabidopsis thaliana integrating image analysis and rosette area modeling for robust quantification of genotype effects. New Phytologist 191 (3):895–907. doi:10.1111/j.1469-8137.2011.03756.x

Bower JE, Zar JH, von Ende CN (1989) Field and Laboratory Methods for General Ecology. Wm. C. Brown Company Publishers, Dubouque, Iowa, USA

Boyes DC, Zayed AM, Ascenzi R, McCaskill AJ, Hoffman NE, Davis KR, Gorlach J (2001) Growth stage-based phenotypic analysis of Arabidopsis: A model for high throughput functional genomics in plants. Plant Cell 13 (7):1499–510

Clark, S. E. (2001) Cell signalling at the shoot meristem. Nat Rev Mol Cell Biol 2(4): 276-284.

Desikan R, Griffiths R, Hancock J, Neill S (2002) A new role for an old enzyme: Nitrate reductase-mediated nitric oxide generation is required for abscisic acid-induced stomatal closure in Arabidopsis thaliana. Proc Natl Acad Sci USA 99 (25):16314–18

Förster B, Osmond CB, Pogson BJ (2009) De novo synthesis and degradation of Lx and V cycle pigments during shade and sun acclimation in avocado leaves. Plant Physiology 149 (2):1179–95. doi:10.1104/pp.108.131417

Hoffmann WA, Poorter H (2002) Avoiding bias in calculations of relative growth rate. Annals of Botany 90 (1):37–42. doi:10.1093/aob/mcf140

Hunt R, Causton DR, Shipley B, Askew AP (2002) A modern tool for classical plant growth analysis. Annals of Botany 90:485–88

Initiative TAG (2000) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408 (6814):796–815. doi:

Jones HG (2007) Monitoring plant and soil water status: Established and novel methods revisited and their relevance to studies of drought tolerance. Journal of Experimental Botany 58:119–30

Lavagi I, Estelle M, Weckwerth W, Beynon J, Bastow RM (2012) From bench to bountiful harvests: A road map for the next decade of Arabidopsis research. The Plant Cell Online 24 (6):2240–47. doi:10.1105/tpc.112.096982

Lee J, Durst RW, Wrolstad RE (2005) Determination of total monomeric anthocyanin pigment content of fruit juices, beverages, natural colorants, and wines by the pH differential method: Collaborative study. Journal of AOAC International 88 (5):1269

Lee J, Rennaker C, Wrolstad RE (2008) Correlation of two anthocyanin quantification methods: HPLC and spectrophotometric methods. Food Chemistry 110 (3):782–86

Meinke DW, Cherry JM, Dean C, Rounsley SD, Koornneef M (1998) Arabidopsis thaliana: A model plant for genome analysis. Science 282 (5389):662–82

Monteith JL, Campbell GS, Potter EA (1988) Theory and performance of a dynamic diffusion porometer. Agricultural and Forest Meteorology 44 (1):27–38.

Morita MT, Tasaka M (2004) Gravity sensing and signaling. Current Opinion in Plant Biology 7 (6):712–18.

Muller K, Tintelnot S, Leubner-Metzger G (2006) Endosperm-limited Brassicaceae seed germination: Abscisic acid ihibits embryo-induced endosperm weakening of Lepidium sativum (cress) and endosperm rupture of cress and Arabidopsis thaliana. Plant and Cell Physiology 47 (7):864–77. doi:10.1093/pcp/pcj059

Neff MM, Chory J (1998) Genetic interactions between phytochrome A, phytochrome B, and cryptochrome 1 during Arabidopsis development. Plant Physiology 118 (1):27–35

Roelfsema MRG, Prins HBA (1995) Effect of abscisic acid on stomatal opening in isolated epidermal strips of abi mutants of Arabidopsis thaliana. Physiologia Plantarum 95 (3):373–78

Turner, S. R. and C. R. Somerville (1997) Collapsed xylem phenotype of Arabidopsis identifies mutants deficient in cellulose deposition in the secondary cell wall. The Plant Cell 9 (5): 689-701.

United Nations Food and Agriculture Organisation,

Weigel D (2012) Natural Variation in Arabidopsis: From Molecular Genetics to Ecological Genomics. Plant Physiology 158 (1):2–22. doi:10.1104/pp.111.189845



Previous Next